STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2X3S3Tyrosine--tRNA ligase. (389 aa)    
Predicted Functional Partners:
A0A1Y2XDE7
tRNA-binding domain-containing protein.
 
 0.993
A0A1Y2WVG0
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.945
A0A1Y2X054
SAICAR_synt domain-containing protein.
      0.900
A0A1Y2XC17
Tyrosine--tRNA ligase.
    
 0.892
A0A1Y2WWX3
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.867
A0A1Y2XG23
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.860
A0A1Y2WMU4
Tryptophan synthase.
  
  
 0.855
A0A1Y2WKR1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.832
A0A1Y2WLV7
Uncharacterized protein.
  
 
 0.794
A0A1Y2X6P2
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.792
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
Server load: low (12%) [HD]