STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2X6D6Glycoside hydrolase family 61 protein. (259 aa)    
Predicted Functional Partners:
A0A1Y2X2E0
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.623
A0A1Y2WKG0
Uncharacterized protein.
   
   0.607
A0A1Y2X906
ERCC4 domain-containing protein.
    
 0.584
A0A1Y2XAG2
Uncharacterized protein.
    
 0.578
A0A1Y2WY18
DNA polymerase.
   
 0.577
A0A1Y2XCH7
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.577
A0A1Y2X339
Uncharacterized protein.
    
 0.576
A0A1Y2XA31
Uncharacterized protein.
   
   0.575
A0A1Y2XDD4
Uncharacterized protein.
   
   0.575
A0A1Y2WX25
Uncharacterized protein.
   
   0.571
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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