A0A1Y2X7G0 protein (Daldinia sp. EC12) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y2X7G0

NAD_binding_2 domain-containing protein. (318 aa)

Predicted Functional Partners:

A0A1Y2WZT4

0.873

A0A1Y2XFX5

0.792

A0A1Y2WWI9

0.775

A0A1Y2X1L0

0.744

A0A1Y2X1J4

0.739

K445DRAFT_7893

0.739

A0A1Y2WRE2

0.738

A0A1Y2X9P2

0.738

A0A1Y2WWN2

0.735

A0A1Y2XGV0

0.733

Your Current Organism:

Daldinia sp. EC12

NCBI taxonomy Id: 1001832
Other names: D. sp. EC12

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1Y2WRE2	A0A1Y2WWN2	A0A1Y2WRE2	A0A1Y2WWN2	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	RPOLD domain-containing protein.	0.998
A0A1Y2WRE2	A0A1Y2X1J4	A0A1Y2WRE2	A0A1Y2X1J4	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Uncharacterized protein.	0.998
A0A1Y2WRE2	A0A1Y2X1L0	A0A1Y2WRE2	A0A1Y2X1L0	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
A0A1Y2WRE2	A0A1Y2X7G0	A0A1Y2WRE2	A0A1Y2X7G0	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	NAD_binding_2 domain-containing protein.	0.738
A0A1Y2WRE2	A0A1Y2X9P2	A0A1Y2WRE2	A0A1Y2X9P2	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
A0A1Y2WRE2	A0A1Y2XGV0	A0A1Y2WRE2	A0A1Y2XGV0	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Uncharacterized protein.	0.999
A0A1Y2WRE2	K445DRAFT_7893	A0A1Y2WRE2	A0A1Y2XD51	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Uncharacterized protein.	0.999
A0A1Y2WWI9	A0A1Y2WZT4	A0A1Y2WWI9	A0A1Y2WZT4	Uncharacterized protein.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.999
A0A1Y2WWI9	A0A1Y2X7G0	A0A1Y2WWI9	A0A1Y2X7G0	Uncharacterized protein.	NAD_binding_2 domain-containing protein.	0.775
A0A1Y2WWI9	A0A1Y2XFX5	A0A1Y2WWI9	A0A1Y2XFX5	Uncharacterized protein.	Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.	0.999
A0A1Y2WWN2	A0A1Y2WRE2	A0A1Y2WWN2	A0A1Y2WRE2	RPOLD domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.998
A0A1Y2WWN2	A0A1Y2X1J4	A0A1Y2WWN2	A0A1Y2X1J4	RPOLD domain-containing protein.	Uncharacterized protein.	0.998
A0A1Y2WWN2	A0A1Y2X1L0	A0A1Y2WWN2	A0A1Y2X1L0	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A1Y2WWN2	A0A1Y2X7G0	A0A1Y2WWN2	A0A1Y2X7G0	RPOLD domain-containing protein.	NAD_binding_2 domain-containing protein.	0.735
A0A1Y2WWN2	A0A1Y2X9P2	A0A1Y2WWN2	A0A1Y2X9P2	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
A0A1Y2WWN2	A0A1Y2XFX5	A0A1Y2WWN2	A0A1Y2XFX5	RPOLD domain-containing protein.	Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.	0.493
A0A1Y2WWN2	A0A1Y2XGV0	A0A1Y2WWN2	A0A1Y2XGV0	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
A0A1Y2WWN2	K445DRAFT_7893	A0A1Y2WWN2	A0A1Y2XD51	RPOLD domain-containing protein.	Uncharacterized protein.	0.998
A0A1Y2WZT4	A0A1Y2WWI9	A0A1Y2WZT4	A0A1Y2WWI9	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	Uncharacterized protein.	0.999
A0A1Y2WZT4	A0A1Y2X7G0	A0A1Y2WZT4	A0A1Y2X7G0	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	NAD_binding_2 domain-containing protein.	0.873