STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2X9Y9Uncharacterized protein. (322 aa)    
Predicted Functional Partners:
A0A1Y2WLH2
Uncharacterized protein.
    
 0.988
A0A1Y2WNM6
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.988
A0A1Y2WRM5
Uncharacterized protein.
   
 0.988
A0A1Y2WS16
PAT1 domain-containing protein.
    
 0.980
A0A1Y2X7P0
YjeF N-terminal domain-containing protein.
   
 0.972
A0A1Y2X958
Nudix hydrolase domain-containing protein.
    
 0.972
A0A1Y2X9Y7
Uncharacterized protein.
    
 0.972
A0A1Y2X7C7
Uncharacterized protein.
    
 0.964
A0A1Y2WQ21
SurE domain-containing protein.
    
 
 0.913
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.909
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.