STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2XAY5Uncharacterized protein; Belongs to the arginase family. (377 aa)    
Predicted Functional Partners:
A0A1Y2X0T0
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.895
A0A1Y2XBK1
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.861
A0A1Y2X856
Uncharacterized protein.
    
 0.857
A0A1Y2X1Q3
Uncharacterized protein; Belongs to the arginase family.
  
  
 
0.776
A0A1Y2XBV4
Phenylalanine ammonia-lyase.
  
 
 0.774
A0A1Y2XES6
Ornithine aminotransferase.
  
 0.743
A0A1Y2WQK9
Uncharacterized protein.
  
 0.737
A0A1Y2WUJ1
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.735
A0A1Y2WSA8
Uncharacterized protein.
  
 0.718
A0A1Y2WUP7
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.718
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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