A0A1Y2XE70 protein (Daldinia sp. EC12) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y2XE70

Uncharacterized protein. (857 aa)

Predicted Functional Partners:

A0A1Y2XG59

0.941

A0A1Y2XER3

0.808

A0A1Y2XFB9

0.781

A0A1Y2WWJ5

0.723

A0A1Y2WM91

0.690

A0A1Y2WXC4

0.662

A0A1Y2X4G7

0.662

A0A1Y2XAA1

0.649

A0A1Y2XD91

0.644

A0A1Y2XD61

0.641

Your Current Organism:

Daldinia sp. EC12

NCBI taxonomy Id: 1001832
Other names: D. sp. EC12

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2WM91	A0A1Y2XE70	Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.	Uncharacterized protein.	0.690
A0A1Y2WWJ5	A0A1Y2XAA1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.902
A0A1Y2WWJ5	A0A1Y2XD61	WD_REPEATS_REGION domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.686
A0A1Y2WWJ5	A0A1Y2XD91	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A1Y2WWJ5	A0A1Y2XE70	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.723
A0A1Y2WXC4	A0A1Y2XE70	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.662
A0A1Y2X4G7	A0A1Y2XE70	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.662
A0A1Y2XAA1	A0A1Y2WWJ5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.902
A0A1Y2XAA1	A0A1Y2XD61	Uncharacterized protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.683
A0A1Y2XAA1	A0A1Y2XD91	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.789
A0A1Y2XAA1	A0A1Y2XE70	Uncharacterized protein.	Uncharacterized protein.	0.649
A0A1Y2XD61	A0A1Y2WWJ5	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	WD_REPEATS_REGION domain-containing protein.	0.686
A0A1Y2XD61	A0A1Y2XAA1	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Uncharacterized protein.	0.683
A0A1Y2XD61	A0A1Y2XD91	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	WD_REPEATS_REGION domain-containing protein.	0.589
A0A1Y2XD61	A0A1Y2XE70	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Uncharacterized protein.	0.641
A0A1Y2XD91	A0A1Y2WWJ5	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A1Y2XD91	A0A1Y2XAA1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.789
A0A1Y2XD91	A0A1Y2XD61	WD_REPEATS_REGION domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.589
A0A1Y2XD91	A0A1Y2XE70	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.644
A0A1Y2XE70	A0A1Y2WM91	Uncharacterized protein.	Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.	0.690