STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2XFI3Carbohydrate-binding module family 18 protein. (481 aa)    
Predicted Functional Partners:
A0A1Y2X1K1
Uncharacterized protein.
   
 0.653
A0A1Y2WTD6
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.642
A0A1Y2WS59
Uncharacterized protein.
   
 0.641
A0A1Y2WV49
Uncharacterized protein.
   
 0.639
A0A1Y2X017
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.639
A0A1Y2WVJ9
Uncharacterized protein.
   
 0.626
A0A1Y2X4Y7
Uncharacterized protein.
   
 0.600
A0A1Y2WTU6
Uncharacterized protein.
   
  0.585
A0A1Y2WL77
Uncharacterized protein.
   
  0.565
A0A1Y2WR55
Uncharacterized protein.
   
  0.557
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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