Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pa2g4Proliferation-associated protein 2G4. (377 aa)    
Predicted Functional Partners:
Rpl35
60S ribosomal protein L35.
  
 
 0.994
Gtpbp4
Nucleolar GTP-binding protein 1.
   
 
 0.993
Wdr18
WD repeat-containing protein 18.
  
 
 0.991
Gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.991
Rsl1d1
Ribosomal L1 domain-containing protein 1.
   
 
 0.989
Pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 
 0.989
Rpl27a
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 
 0.988
Nsa2
Ribosome biogenesis protein NSA2 homolog.
   
 
 0.988
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.988
Rsl24d1
Probable ribosome biogenesis protein RLP24.
   
 
 0.987
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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