Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Fkbp10Peptidylprolyl isomerase. (549 aa)    
Predicted Functional Partners:
Efemp2
EGF-containing fibulin-like extracellular matrix protein 2.
   
 
 0.898
Nudcd1
nudC domain-containing protein 1.
    
   0.896
Htr5a
5-hydroxytryptamine receptor 5A.
      
 0.891
Grin3a
Glutamate receptor ionotropic, NMDA 3A isoform X1.
      
 0.879
Col6a2
Collagen alpha-2(VI) chain isoform X1.
   
 
 0.833
Copz2
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
 
 0.832
Col6a1
Collagen alpha-1(VI) chain.
   
 
 0.821
Mrgprf
Mas-related G-protein coupled receptor member F; Belongs to the G-protein coupled receptor 1 family.
      
 0.795
Prss23
Serine protease 23.
   
  
 0.781
Vgll3
Transcription cofactor vestigial-like protein 3.
      
 0.769
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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