STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Iqcb1IQ calmodulin-binding motif-containing protein 1. (582 aa)    
Predicted Functional Partners:
Cep290
Centrosomal protein of 290 kDa.
    
 
 0.954
Rab11b
Ras-related protein Rab-11B.
   
 0.845
Rab11a
Ras-related protein Rab-11A.
   
 0.845
Rab25
Ras-related protein Rab-25.
   
 0.780
Rabl2b
Rab-like protein 2B isoform X1.
   
 0.780
Rab3ip
rab-3A-interacting protein isoform X1.
    
 0.766
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 
 0.750
Nphp1
Nephrocystin-1.
    
 0.740
Rab3il1
Guanine nucleotide exchange factor for Rab-3A isoform X1.
    
 0.739
Calml4
Calmodulin-like protein 4 isoform X1.
    
 0.716
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.