Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (224 aa)    
Predicted Functional Partners:
Sod1
Superoxide dismutase [Cu-Zn].
  
 0.996
Gpx8
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.975
Sirt3
NAD-dependent protein deacetylase sirtuin-3, mitochondrial.
    
 0.967
Gpx4
Phospholipid hydroperoxide glutathione peroxidase, mitochondrial; Belongs to the glutathione peroxidase family.
   
 0.966
Cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.960
Ppargc1a
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha.
    
 0.957
Gpx1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.949
Mrpl17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.947
Mrpl15
39S ribosomal protein L15, mitochondrial.
  
 
 0.937
Mrps11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.933
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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