Rfxank protein (Dipodomys ordii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

Rfxank

DNA-binding protein RFXANK. (256 aa)

Predicted Functional Partners:

Rfxap

0.980

Ciita

0.958

Hdac4

0.931

Rfx1

0.832

Rfx7

0.791

Nlrc5

0.781

Rfx5

0.756

Rfx2

0.752

Hdac5

0.744

Hdac9

0.728

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ciita	Rfx1	ENSDORP00000002129	ENSDORP00000015531	MHC class II transactivator isoform X1.	MHC class II regulatory factor RFX1.	0.645
Ciita	Rfx2	ENSDORP00000002129	ENSDORP00000007585	MHC class II transactivator isoform X1.	DNA-binding protein RFX2.	0.403
Ciita	Rfxank	ENSDORP00000002129	ENSDORP00000001351	MHC class II transactivator isoform X1.	DNA-binding protein RFXANK.	0.958
Ciita	Rfxap	ENSDORP00000002129	ENSDORP00000002366	MHC class II transactivator isoform X1.	Regulatory factor X-associated protein.	0.932
Hdac4	Hdac5	ENSDORP00000021858	ENSDORP00000015416	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.943
Hdac4	Rfxank	ENSDORP00000021858	ENSDORP00000001351	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	DNA-binding protein RFXANK.	0.931
Hdac5	Hdac4	ENSDORP00000015416	ENSDORP00000021858	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.943
Hdac5	Rfxank	ENSDORP00000015416	ENSDORP00000001351	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	DNA-binding protein RFXANK.	0.744
Hdac9	Rfxank	ENSDORP00000023705	ENSDORP00000001351	Histone deacetylase 9 isoform X4.	DNA-binding protein RFXANK.	0.728
Nlrc5	Rfxank	ENSDORP00000008909	ENSDORP00000001351	Protein NLRC5 isoform X2.	DNA-binding protein RFXANK.	0.781
Nlrc5	Rfxap	ENSDORP00000008909	ENSDORP00000002366	Protein NLRC5 isoform X2.	Regulatory factor X-associated protein.	0.684
Rfx1	Ciita	ENSDORP00000015531	ENSDORP00000002129	MHC class II regulatory factor RFX1.	MHC class II transactivator isoform X1.	0.645
Rfx1	Rfxank	ENSDORP00000015531	ENSDORP00000001351	MHC class II regulatory factor RFX1.	DNA-binding protein RFXANK.	0.832
Rfx1	Rfxap	ENSDORP00000015531	ENSDORP00000002366	MHC class II regulatory factor RFX1.	Regulatory factor X-associated protein.	0.900
Rfx2	Ciita	ENSDORP00000007585	ENSDORP00000002129	DNA-binding protein RFX2.	MHC class II transactivator isoform X1.	0.403
Rfx2	Rfxank	ENSDORP00000007585	ENSDORP00000001351	DNA-binding protein RFX2.	DNA-binding protein RFXANK.	0.752
Rfx2	Rfxap	ENSDORP00000007585	ENSDORP00000002366	DNA-binding protein RFX2.	Regulatory factor X-associated protein.	0.847
Rfx5	Rfxank	ENSDORP00000015021	ENSDORP00000001351	DNA-binding protein RFX5.	DNA-binding protein RFXANK.	0.756
Rfx5	Rfxap	ENSDORP00000015021	ENSDORP00000002366	DNA-binding protein RFX5.	Regulatory factor X-associated protein.	0.855
Rfx7	Rfxank	ENSDORP00000018336	ENSDORP00000001351	DNA-binding protein RFX7 isoform X2.	DNA-binding protein RFXANK.	0.791