Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lemd2LEM domain-containing protein 2 isoform X2. (490 aa)    
Predicted Functional Partners:
Chmp7
Charged multivesicular body protein 7.
     
 0.891
Banf1
Barrier-to-autointegration factor.
    
 0.871
Ist1
IST1 homolog isoform X1.
    
 0.842
Rrbp1
Ribosome-binding protein 1 isoform X2.
    
 0.814
Lmna
Lamin; Belongs to the intermediate filament family.
    
 0.785
Ankle2
Ankyrin repeat and LEM domain-containing protein 2.
    
 0.722
Sun2
SUN domain-containing protein 2 isoform X1.
   
 
 0.717
Emd
Emerin.
   
 0.711
Banf2
Barrier-to-autointegration factor-like protein.
    
 0.697
Fzr1
Fizzy-related protein homolog.
   
  0.678
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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