STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lemd2LEM domain-containing protein 2 isoform X2. (490 aa)    
Predicted Functional Partners:
Chmp7
Charged multivesicular body protein 7.
     
 0.841
Ist1
IST1 homolog isoform X1.
    
 0.752
Fzr1
Fizzy-related protein homolog.
   
  0.747
Lmna
Lamin; Belongs to the intermediate filament family.
    
 0.684
Ptk7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.673
Mib2
E3 ubiquitin-protein ligase MIB2.
   
  0.670
Mysm1
Histone H2A deubiquitinase MYSM1.
    
 0.660
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.649
Slf1
Ankyrin repeat domain-containing protein 32 isoform X1.
   
 0.644
Gas7
Growth arrest-specific protein 7.
    
 0.643
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.