Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dnah1Dynein heavy chain 1, axonemal. (4366 aa)    
Predicted Functional Partners:
Cfap43
Cilia- and flagella-associated protein 43.
   
 
 0.991
Dnah10
Dynein heavy chain 10, axonemal.
   
 
 0.990
Dnah6
Dynein heavy chain 6, axonemal.
   
 
 0.984
Ttc29
Tetratricopeptide repeat protein 29.
   
 
 0.977
Cfap44
Cilia- and flagella-associated protein 44.
   
 0.975
Efhc1
EF-hand domain-containing protein 1.
  
 
 0.974
Efhb
LOW QUALITY PROTEIN: EF-hand domain-containing family member B.
   
   0.968
Dnah8
Dynein heavy chain 8, axonemal.
   
 
 0.966
Gas8
Growth arrest-specific protein 8 isoform X1.
  
 
 0.964
Wdr63
WD repeat-containing protein 63.
  
 0.963
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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