STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbc1d32Protein broad-minded. (1299 aa)    
Predicted Functional Partners:
Cfap20
Cilia- and flagella-associated protein 20.
    
 
 0.860
Fam149b
Protein FAM149B1.
    
 
 0.809
Fam149a
Protein FAM149A.
    
 
 0.666
Wdpcp
WD repeat-containing and planar cell polarity effector protein fritz homolog.
   
  
 0.624
4930452B06Rik
Uncharacterized protein C3orf67 homolog.
    
 
 0.570
Wdr90
WD repeat-containing protein 90.
    
 
 0.570
Sclt1
Sodium channel and clathrin linker 1 isoform X1.
      
 0.538
Hexa
Beta-hexosaminidase.
    
   0.518
Hexb
Beta-hexosaminidase.
    
   0.518
Ddx59
Probable ATP-dependent RNA helicase DDX59 isoform X1.
      
 0.442
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.