STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Npepl1Probable aminopeptidase NPEPL1. (511 aa)    
Predicted Functional Partners:
Cbs
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.810
Got2
Aspartate aminotransferase.
   
 0.804
Nfs1
Cysteine desulfurase, mitochondrial.
  
 
 0.723
Scly
Selenocysteine lyase.
  
 
 0.723
Gclm
Glutamate--cysteine ligase regulatory subunit.
   
  0.703
Rimklb
Beta-citrylglutamate synthase B.
  
 
 0.695
Rimkla
N-acetylaspartylglutamate synthase A.
  
 
 0.695
Cndp2
Cytosolic non-specific dipeptidase.
  
 
 0.692
Cndp1
beta-Ala-His dipeptidase isoform X1.
  
 
 0.692
Got1l1
Putative aspartate aminotransferase, cytoplasmic 2.
   
 0.691
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.