Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Serpini2Serpin I2 isoform X2; Belongs to the serpin family. (405 aa)    
Predicted Functional Partners:
Wdr49
WD repeat-containing protein 49.
 
 
 
 0.861
Serpina7
Thyroxine-binding globulin; Belongs to the serpin family.
  
 
  
0.804
Ubqln1
Ubiquilin-1 isoform X1.
    
   0.772
Pla2g1b
Phospholipase A(2).
   
  
 0.729
Bag6
Large proline-rich protein BAG6 isoform X5.
    
   0.728
Serpinb8
Serpin B8; Belongs to the serpin family.
   
    0.700
Cpb1
Carboxypeptidase B.
   
 
 0.695
2610318N02Rik
Uncharacterized protein LOC105997186.
   
  
 0.606
Serpina12
Serpin A12; Belongs to the serpin family.
  
 
 
0.591
Fam124a
Protein FAM124A.
      
 0.576
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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