STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ube2l6ubiquitin/ISG15-conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)    
Predicted Functional Partners:
Uba52
ubiquitin-60S ribosomal protein L40.
   
 0.986
Park2
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
    
 0.979
Arih1
RBR-type E3 ubiquitin transferase.
    
 0.972
LOC105986631
Ubiquitin-like.
   
 0.962
ENSDORP00000023996
annotation not available
   
 0.955
Ube2v1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.955
Rps27a
ubiquitin-40S ribosomal protein S27a.
    
 0.948
ENSDORP00000019733
annotation not available
    
 0.948
LOC105993014
ubiquitin-40S ribosomal protein S27a pseudogene.
    
 0.948
Isg15
Ubiquitin-like protein ISG15.
   
 0.935
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.