STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abca3ATP-binding cassette sub-family A member 3. (1476 aa)    
Predicted Functional Partners:
Abca2
ATP-binding cassette sub-family A member 2.
    
0.725
LOC105981893
ATP-binding cassette sub-family A member 3-like.
  
  
 
0.710
Abca4
Retinal-specific ATP-binding cassette transporter.
  
 
0.673
Abca1
ATP-binding cassette sub-family A member 1 isoform X1.
  
 
0.640
Atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.608
Atp5f1c
ATP synthase subunit gamma.
   
   0.591
Cox15
Cytochrome c oxidase assembly protein COX15 homolog.
    
 0.579
Igbp1
Immunoglobulin-binding protein 1.
    
 0.572
Atp5d
ATP synthase subunit delta, mitochondrial.
   
   0.571
Abcc4
Multidrug resistance-associated protein 4.
   
 0.552
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.