STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kmt5aN-lysine methyltransferase SETD8. (341 aa)    
Predicted Functional Partners:
Cenpa
Histone H3-like centromeric protein A isoform X1.
   
 0.904
Pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
   0.874
Camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.864
Dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.860
Prdm9
Histone-lysine N-methyltransferase PRDM9-like.
   
 0.858
Prdm4
PR domain zinc finger protein 4.
   
 0.857
Prdm5
PR/SET domain 5.
   
 0.853
Setd7
Histone-lysine N-methyltransferase SETD7.
   
 0.851
Plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
  0.848
Rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.845
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.