STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmp15Matrix metalloproteinase-15. (536 aa)    
Predicted Functional Partners:
Timp2
Metalloproteinase inhibitor 2.
    
 0.984
Hbegf
Proheparin-binding EGF-like growth factor.
    
 0.946
Timp1
Metalloproteinase inhibitor 1.
   
 0.942
Gnai2
Guanine nucleotide-binding protein G(I) subunit alpha-2.
     
  0.900
Gnai3
Guanine nucleotide-binding protein G(K) subunit alpha.
     
  0.900
Gnai1
Guanine nucleotide-binding protein G(I) subunit alpha-1.
     
  0.900
Furin
Furin; Belongs to the peptidase S8 family.
    
 0.898
Pcsk4
Proprotein convertase subtilisin/kexin type 4.
    
 0.898
Timp3
Metalloproteinase inhibitor 3.
   
 0.885
Fbn2
Fibrillin-2.
    
 0.804
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.