Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Klhl11Kelch-like protein 11. (708 aa)    
Predicted Functional Partners:
Cul3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.989
Cul1
Cullin-1; Belongs to the cullin family.
    
 0.876
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.830
Psmd12
26S proteasome non-ATPase regulatory subunit 12.
    
   0.820
Rnf123
E3 ubiquitin-protein ligase RNF123.
    
   0.790
Ccin
Calicin.
    
 0.743
Fh1
Fumarate hydratase, mitochondrial.
      
 0.711
Cacul1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.687
Bin1
Myc box-dependent-interacting protein 1 isoform X5.
      
 0.684
Kbtbd12
Kelch repeat and BTB domain-containing protein 12 isoform X1.
    
 0.672
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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