STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acsm5Acyl-coenzyme A synthetase ACSM5, mitochondrial isoform X1. (578 aa)    
Predicted Functional Partners:
Cs
Citrate synthase; Belongs to the citrate synthase family.
  
 0.930
Acads
Short-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 
 0.892
Scp2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.892
Hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 
 0.891
Adhfe1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial.
  
 
 0.770
Acsf2
acyl-CoA synthetase family member 2, mitochondrial.
 
0.748
Metap1d
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
  
 
 0.735
Sord
Sorbitol dehydrogenase.
  
 
 0.733
Hadhb
Trifunctional enzyme subunit beta, mitochondrial.
  
 
 0.732
Sdhb
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.730
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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