Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dennd4aC-myc promoter-binding protein. (1864 aa)    
Predicted Functional Partners:
Rab10
Ras-related protein Rab-10.
    
 0.848
Ywhab
14-3-3 protein beta/alpha; Belongs to the 14-3-3 family.
    
   0.820
Rap1gds1
Rap1 GTPase-GDP dissociation stimulator 1 isoform X1.
      
 0.818
Mettl6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
    
   0.776
Ywhah
14-3-3 protein eta; Belongs to the 14-3-3 family.
    
   0.759
Ywhaq
14-3-3 protein theta; Belongs to the 14-3-3 family.
    
   0.740
LOC105996819
14-3-3 protein theta; Belongs to the 14-3-3 family.
    
   0.740
Rab8b
Ras-related protein Rab-8B.
    
 0.722
Rab8a
Ras-related protein Rab-8A.
    
 0.722
Dennd5a
DENN domain-containing protein 5A.
    
 
 0.718
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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