STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stra6Stimulated by retinoic acid gene 6 protein homolog. (670 aa)    
Predicted Functional Partners:
Rbp4
Retinol-binding protein; Retinol-binding protein that mediates retinol transport in blood plasma.
     
 0.853
Rbp1
Retinol-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.835
Ttr
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
 0.806
Wdr90
WD repeat-containing protein 90.
    
 0.653
Ift81
Intraflagellar transport protein 81 homolog.
    
 0.636
Gak
cyclin-G-associated kinase isoform X2.
   
 0.635
Katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.628
Ift22
Intraflagellar transport protein 22 homolog isoform X1.
    
  0.624
Rnf146
E3 ubiquitin-protein ligase RNF146.
    
 0.618
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
  0.612
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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