STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Klhl35LOW QUALITY PROTEIN: kelch-like protein 35. (419 aa)    
Predicted Functional Partners:
Bbs1
Bardet-Biedl syndrome 1 protein.
    
 0.798
Bbs9
Protein PTHB1 isoform X3.
    
 0.794
Bbs4
Bardet-Biedl syndrome 4 protein isoform X2.
    
 0.779
Bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.738
ENSDORP00000001292
annotation not available
    
 0.724
Ttc8
Tetratricopeptide repeat protein 8 isoform X2.
    
 0.724
Sqstm1
Sequestosome-1.
    
 0.710
Gsap
Gamma-secretase-activating protein.
    
 0.710
Cul3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.694
Cul1
Cullin-1; Belongs to the cullin family.
    
 0.679
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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