STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc73Coiled-coil domain-containing protein 73. (1013 aa)    
Predicted Functional Partners:
Ptpdc1
Protein tyrosine phosphatase domain-containing protein 1 isoform X1.
      
 0.562
Ercc6l
DNA excision repair protein ERCC-6-like.
      
 0.557
Kif20a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.538
Klk9
Kallikrein-9; Belongs to the peptidase S1 family.
      
 0.538
Ptgis
Prostacyclin synthase; Belongs to the cytochrome P450 family.
      
 0.538
Setd2
Histone-lysine N-methyltransferase SETD2.
      
 0.538
Cdcp2
CUB domain-containing protein 2.
      
 0.537
Dph2
2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2.
      
 0.537
Lats2
Serine/threonine-protein kinase LATS2.
      
 0.537
Kank3
KN motif and ankyrin repeat domain-containing protein 3.
      
 0.537
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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