STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mamdc4Apical endosomal glycoprotein. (1199 aa)    
Predicted Functional Partners:
Ptk7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.731
Cel
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.606
Cd47
Leukocyte surface antigen CD47 isoform X4.
    
  0.603
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.589
LOC105994451
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.588
Nlgn3
Neuroligin-3 isoform X1.
    
 
 0.588
LOC105994452
Liver carboxylesterase 1-like.
    
 
 0.588
Nlgn2
Neuroligin-2 isoform X1.
    
 
 0.588
Ces2h
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.588
Fam78a
Protein FAM78A isoform X1.
    
 
 0.588
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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