Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Arhgap5Rho GTPase-activating protein 5 isoform X1. (1503 aa)    
Predicted Functional Partners:
Rhoa
Transforming protein RhoA.
    
 0.982
Rasa1
Ras GTPase-activating protein 1.
   
 0.960
Src
Tyrosine-protein kinase.
   
 0.958
Arhgap35
Rho GTPase-activating protein 35.
   
 
 
0.906
Thy1
Thy-1 membrane glycoprotein.
     
  0.900
LOC105989352
Cell division control protein 42 homolog.
    
 0.855
Rnd3
Rho-related GTP-binding protein RhoE.
    
 0.837
Rnd1
Rho-related GTP-binding protein Rho6.
    
 0.835
Rhoc
Rho-related GTP-binding protein RhoC.
    
 0.832
ENSDORP00000011621
annotation not available
    
 0.832
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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