Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pcyox1Prenylcysteine oxidase 1. (505 aa)    
Predicted Functional Partners:
Pyurf
Protein preY, mitochondrial.
      
 0.792
Nenf
Neudesin; Belongs to the cytochrome b5 family.
      
 0.680
Foxred2
FAD-dependent oxidoreductase domain-containing protein 2.
      
 0.667
Card19
Bcl10-interacting CARD protein isoform X1.
      
 0.665
Fkbp2
Peptidylprolyl isomerase.
      
 0.655
Abtb1
Ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X4.
   
  
 0.655
Sumf2
Sulfatase-modifying factor 2 isoform X1.
      
 0.648
Alkbh6
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6.
      
 0.635
Plac8l1
PLAC8-like protein 1.
    
 
 0.605
Gmcl1
Germ cell-less protein-like 1 isoform X1.
      
 0.605
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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