STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FblrRNA 2'-O-methyltransferase fibrillarin. (308 aa)    
Predicted Functional Partners:
Nol6
Nucleolar protein 6.
   
 0.999
Rrp9
U3 small nucleolar RNA-interacting protein 2.
   
 0.999
Dkc1
H/ACA ribonucleoprotein complex subunit 4.
   
 
 0.999
Utp4
Cirhin.
   
 0.999
Pwp2
Periodic tryptophan protein 2 homolog.
   
 
 0.998
Nhp2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.998
Utp15
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.998
Heatr1
HEAT repeat-containing protein 1.
   
 0.998
Tbl3
Transducin beta-like protein 3.
   
 
 0.998
Bysl
Bystin.
   
 
 0.998
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.