STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppm1aProtein phosphatase 1A. (382 aa)    
Predicted Functional Partners:
Map2k7
Dual specificity mitogen-activated protein kinase kinase 7 isoform X1.
   
  0.887
Map2k3
Dual specificity mitogen-activated protein kinase kinase 3.
    
  0.862
Map2k6
Dual specificity mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
    
  0.862
Ppm1b
Protein phosphatase 1B isoform X1.
  
  
0.810
Smad2
Mothers against decapentaplegic homolog.
    
 0.798
Smad3
Mothers against decapentaplegic homolog.
    
 0.783
Isg15
Ubiquitin-like protein ISG15.
   
 0.754
Ppm1n
Probable protein phosphatase 1N.
  
  
0.750
Smad4
Mothers against decapentaplegic homolog.
    
 0.729
Prkaa2
Non-specific serine/threonine protein kinase.
   
  0.717
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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