STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxb7Homeobox protein Hox-B7. (217 aa)    
Predicted Functional Partners:
Hoxb6
Homeobox protein Hox-B6.
   
 
0.990
Hoxb5
Homeobox protein Hox-B5.
   
 
0.978
Hoxa7
Homeobox protein Hox-A7.
  
  
0.927
Hoxb8
Homeobox protein Hox-B8 isoform X1.
   
 
0.864
Hoxc6
Homeobox protein Hox-C6 isoform X1.
   
 
0.855
Hoxd4
Homeobox protein Hox-D4.
   
 
0.836
Pbx2
pre-B-cell leukemia transcription factor 2.
    
 0.832
Pbx1
pre-B-cell leukemia transcription factor 1 isoform X1.
    
 0.832
ENSDORP00000022385
annotation not available
    
 0.832
Nr5a2
Nuclear receptor subfamily 5 group A member 2 isoform X1.
    
 0.827
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.