STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BlmhBleomycin hydrolase; Belongs to the peptidase C1 family. (455 aa)    
Predicted Functional Partners:
Nudt12
Peroxisomal NADH pyrophosphatase NUDT12.
    
 
 0.894
Nudt13
Nucleoside diphosphate-linked moiety X motif 13.
    
   0.701
Kera
Keratocan.
    
   0.696
LOC105989822
Aminopeptidase.
    
 0.609
Tpp2
Tripeptidyl-peptidase 2 isoform X1.
     
 0.586
Pgk1
Phosphoglycerate kinase.
   
  
 0.569
Tsfm
Ts translation elongation factor, mitochondrial.
     
 0.540
Clpb
Caseinolytic peptidase B protein homolog.
      
 0.538
Spata4
Spermatogenesis-associated protein 4.
      
 0.537
Ttc19
Tetratricopeptide repeat protein 19, mitochondrial.
      
 0.537
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.