STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MagohbProtein mago nashi homolog 2 isoform X1. (102 aa)    
Predicted Functional Partners:
Rbm8a
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.995
Ranbp2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
  0.989
Eif4a3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.988
Pym1
Partner of Y14 and mago isoform X2.
    
 0.970
Srsf3
Serine/arginine-rich splicing factor 3.
   
 0.967
Srsf1
Serine/arginine-rich splicing factor 1.
   
 0.964
Upf3b
Regulator of nonsense transcripts 3B isoform X2.
    
 0.962
Alyref
THO complex subunit 4.
   
 0.957
Poldip3
Polymerase delta-interacting protein 3.
   
 0.936
Ipo13
Importin-13.
    
 
 0.922
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.