STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc27a5Bile acyl-CoA synthetase. (690 aa)    
Predicted Functional Partners:
Baat
Bile acid-CoA:amino acid N-acyltransferase-like isoform X1.
   
 
 0.925
Bbs1
Bardet-Biedl syndrome 1 protein.
   
 0.916
Bbs9
Protein PTHB1 isoform X3.
   
 0.915
Bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.913
Bbs4
Bardet-Biedl syndrome 4 protein isoform X2.
    
 0.904
Scp2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.887
Cyp27a1
Sterol 26-hydroxylase, mitochondrial; Belongs to the cytochrome P450 family.
   
 
 0.885
Amacr
alpha-methylacyl-CoA racemase.
   
 
 0.874
Acot8
Acyl-coenzyme A thioesterase 8.
     
 0.866
Slc27a4
Long-chain fatty acid transport protein 4.
  
  
 
0.859
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.