STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubqln4Ubiquilin-4. (353 aa)    
Predicted Functional Partners:
Mysm1
Histone H2A deubiquitinase MYSM1.
   
 0.995
Itsn2
Intersectin-2.
    
 0.989
Psmd4
26S proteasome non-ATPase regulatory subunit 4 isoform X1.
   
 0.983
Psmd12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.978
Psmd14
26S proteasome non-ATPase regulatory subunit 14.
   
 0.978
Psmd3
26S proteasome non-ATPase regulatory subunit 3.
   
 0.974
Psmc2
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.973
Psmd6
26S proteasome non-ATPase regulatory subunit 6.
   
 0.973
Psmd11
26S proteasome non-ATPase regulatory subunit 11.
   
 0.973
Psmc3
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.972
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.