STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ebf1Transcription factor COE1 isoform X1. (592 aa)    
Predicted Functional Partners:
Ufd1
Ubiquitin fusion degradation protein 1 homolog isoform X1.
    
 
 0.763
Plaa
Phospholipase A-2-activating protein.
    
   0.749
Yod1
Ubiquitin thioesterase OTU1.
    
   0.749
Vcp
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.685
Spata5
Spermatogenesis-associated protein 5.
    
 0.677
Eef1g
Elongation factor 1-gamma; Belongs to the GST superfamily.
    
   0.558
Lhx2
LIM/homeobox protein Lhx2 isoform X1.
   
 
 0.557
Pparg
Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...]
     
 0.553
Dolk
Dolichol kinase.
    
   0.538
LOC105997763
Cytochrome b5 reductase 4 isoform X2.
    
 0.533
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.