Ehbp1l1 protein (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Ehbp1l1

EH domain binding protein 1 like 1. (656 aa)

Predicted Functional Partners:

Magi3

0.876

Cask

0.775

Rab13

0.742

Rab10

0.705

Capzb

0.700

Rab8b

0.669

Rab8a

0.663

Tpm1

0.661

LOC105984756

0.661

Numa1

0.661

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Capzb	Cask	ENSDORP00000025054	ENSDORP00000012401	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	0.550
Capzb	Ehbp1l1	ENSDORP00000025054	ENSDORP00000011795	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	EH domain binding protein 1 like 1.	0.700
Capzb	Rab10	ENSDORP00000025054	ENSDORP00000023491	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Ras-related protein Rab-10.	0.456
Capzb	Rab13	ENSDORP00000025054	ENSDORP00000001488	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Ras-related protein Rab-13.	0.456
Capzb	Rab8a	ENSDORP00000025054	ENSDORP00000021178	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Ras-related protein Rab-8A.	0.478
Capzb	Rab8b	ENSDORP00000025054	ENSDORP00000018453	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Ras-related protein Rab-8B.	0.478
Cask	Capzb	ENSDORP00000012401	ENSDORP00000025054	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.550
Cask	Ehbp1l1	ENSDORP00000012401	ENSDORP00000011795	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	EH domain binding protein 1 like 1.	0.775
Cask	LOC105984756	ENSDORP00000012401	ENSDORP00000005812	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Tropomyosin alpha-3 chain-like.	0.411
Cask	Magi3	ENSDORP00000012401	ENSDORP00000006601	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.	0.790
Cask	Numa1	ENSDORP00000012401	ENSDORP00000011219	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Nuclear mitotic apparatus protein 1.	0.411
Cask	Tpm1	ENSDORP00000012401	ENSDORP00000002291	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Tropomyosin alpha-1 chain isoform X4; Belongs to the tropomyosin family.	0.411
Ehbp1l1	Capzb	ENSDORP00000011795	ENSDORP00000025054	EH domain binding protein 1 like 1.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.700
Ehbp1l1	Cask	ENSDORP00000011795	ENSDORP00000012401	EH domain binding protein 1 like 1.	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	0.775
Ehbp1l1	LOC105984756	ENSDORP00000011795	ENSDORP00000005812	EH domain binding protein 1 like 1.	Tropomyosin alpha-3 chain-like.	0.661
Ehbp1l1	Magi3	ENSDORP00000011795	ENSDORP00000006601	EH domain binding protein 1 like 1.	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.	0.876
Ehbp1l1	Numa1	ENSDORP00000011795	ENSDORP00000011219	EH domain binding protein 1 like 1.	Nuclear mitotic apparatus protein 1.	0.661
Ehbp1l1	Rab10	ENSDORP00000011795	ENSDORP00000023491	EH domain binding protein 1 like 1.	Ras-related protein Rab-10.	0.705
Ehbp1l1	Rab13	ENSDORP00000011795	ENSDORP00000001488	EH domain binding protein 1 like 1.	Ras-related protein Rab-13.	0.742
Ehbp1l1	Rab8a	ENSDORP00000011795	ENSDORP00000021178	EH domain binding protein 1 like 1.	Ras-related protein Rab-8A.	0.663