STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chd1lchromodomain-helicase-DNA-binding protein 1-like isoform X1. (901 aa)    
Predicted Functional Partners:
Parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
   
 0.958
Pole3
DNA polymerase epsilon subunit 3.
    
 0.941
Ak9
Adenylate kinase 9.
    
  0.891
Parp2
Poly [ADP-ribose] polymerase.
   
 0.890
Baz1b
Tyrosine-protein kinase BAZ1B.
    
 0.870
Baz2b
Bromodomain adjacent to zinc finger domain protein 2B isoform X4.
    
 0.861
Baz1a
Bromodomain adjacent to zinc finger domain protein 1A.
    
 0.861
Baz2a
Bromodomain adjacent to zinc finger domain protein 2A isoform X1.
    
 0.861
Bptf
Nucleosome-remodeling factor subunit BPTF isoform X7.
   
 
 0.848
Ddb2
DNA damage-binding protein 2 isoform X1.
    
 0.842
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.