STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tatdn3Putative deoxyribonuclease TATDN3 isoform X2. (274 aa)    
Predicted Functional Partners:
Katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
     
 0.570
Mblac1
Metallo-beta-lactamase domain-containing protein 1.
      
 0.563
Gpcpd1
Glycerophosphocholine phosphodiesterase GPCPD1 isoform X1.
     
 0.540
Angel2
Protein angel homolog 2 isoform X1.
      
 0.538
Otol1
Otolin-1.
      
 0.538
Bend7
BEN domain-containing protein 7 isoform X6.
      
 0.538
Lypd6b
ly6/PLAUR domain-containing protein 6B.
      
 0.538
Rps6kc1
Ribosomal protein S6 kinase delta-1 isoform X4.
      
 0.538
Shld1
Uncharacterized protein C20orf196 homolog.
      
 0.538
Optn
Optineurin isoform X1.
      
 0.537
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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