STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105996979Zinc finger protein with KRAB and SCAN domains 4-like. (526 aa)    
Predicted Functional Partners:
Usf2
Upstream stimulatory factor 2.
    
 0.637
LOC105995266-2
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.
    
 0.636
Lamtor2
Ragulator complex protein LAMTOR2.
    
  0.612
Mrps10
28S ribosomal protein S10, mitochondrial.
   
  0.611
Chchd1
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 isoform X1.
   
  0.610
Mrps11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
    
  0.610
Dap3
28S ribosomal protein S29, mitochondrial isoform X1.
   
  0.609
Nme8
Thioredoxin domain-containing protein 3 isoform X1.
    
 0.608
Kdm6b
Lysine-specific demethylase 6B isoform X2.
    
 0.606
Mrps15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
  0.605
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.