STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nphp3Nephrocystin-3. (911 aa)    
Predicted Functional Partners:
Leo1
RNA polymerase-associated protein LEO1.
    
 0.921
Unc119b
Protein unc-119 homolog B.
    
 0.853
Kif5c
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.833
Kif5a
Kinesin heavy chain isoform 5A isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.833
Kif5b
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.833
Tep1
Telomerase protein component 1 isoform X3.
    
 0.803
Cdc73
Parafibromin.
    
 0.764
Cdc16
Cell division cycle protein 16 homolog.
    
 0.763
Paf1
RNA polymerase II-associated factor 1 homolog.
    
 0.759
Anapc1
Anaphase-promoting complex subunit 1.
    
 0.758
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.