Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Agxt | Alad | ENSDORP00000023935 | ENSDORP00000002881 | Serine--pyruvate aminotransferase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.469 |
Agxt | Alas2 | ENSDORP00000023935 | ENSDORP00000014130 | Serine--pyruvate aminotransferase. | 5-aminolevulinate synthase. | 0.881 |
Agxt | Dao | ENSDORP00000023935 | ENSDORP00000008545 | Serine--pyruvate aminotransferase. | D-amino-acid oxidase. | 0.927 |
Agxt | Gldc | ENSDORP00000023935 | ENSDORP00000007188 | Serine--pyruvate aminotransferase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.935 |
Agxt | Pipox | ENSDORP00000023935 | ENSDORP00000001144 | Serine--pyruvate aminotransferase. | Peroxisomal sarcosine oxidase. | 0.938 |
Agxt | Sardh | ENSDORP00000023935 | ENSDORP00000014752 | Serine--pyruvate aminotransferase. | Sarcosine dehydrogenase, mitochondrial. | 0.925 |
Agxt | Shmt1 | ENSDORP00000023935 | ENSDORP00000005009 | Serine--pyruvate aminotransferase. | LOW QUALITY PROTEIN: serine hydroxymethyltransferase, cytosolic. | 0.945 |
Agxt | Shmt2 | ENSDORP00000023935 | ENSDORP00000010772 | Serine--pyruvate aminotransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.945 |
Agxt | Tha1 | ENSDORP00000023935 | ENSDORP00000016838 | Serine--pyruvate aminotransferase. | Probable low-specificity L-threonine aldolase 2. | 0.942 |
Alad | Agxt | ENSDORP00000002881 | ENSDORP00000023935 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Serine--pyruvate aminotransferase. | 0.469 |
Alad | Alas2 | ENSDORP00000002881 | ENSDORP00000014130 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 5-aminolevulinate synthase. | 0.934 |
Alas2 | Agxt | ENSDORP00000014130 | ENSDORP00000023935 | 5-aminolevulinate synthase. | Serine--pyruvate aminotransferase. | 0.881 |
Alas2 | Alad | ENSDORP00000014130 | ENSDORP00000002881 | 5-aminolevulinate synthase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.934 |
Alas2 | Dao | ENSDORP00000014130 | ENSDORP00000008545 | 5-aminolevulinate synthase. | D-amino-acid oxidase. | 0.870 |
Alas2 | Gldc | ENSDORP00000014130 | ENSDORP00000007188 | 5-aminolevulinate synthase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.893 |
Alas2 | Pipox | ENSDORP00000014130 | ENSDORP00000001144 | 5-aminolevulinate synthase. | Peroxisomal sarcosine oxidase. | 0.870 |
Alas2 | Sardh | ENSDORP00000014130 | ENSDORP00000014752 | 5-aminolevulinate synthase. | Sarcosine dehydrogenase, mitochondrial. | 0.901 |
Alas2 | Shmt1 | ENSDORP00000014130 | ENSDORP00000005009 | 5-aminolevulinate synthase. | LOW QUALITY PROTEIN: serine hydroxymethyltransferase, cytosolic. | 0.881 |
Alas2 | Shmt2 | ENSDORP00000014130 | ENSDORP00000010772 | 5-aminolevulinate synthase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.881 |
Alas2 | Sord | ENSDORP00000014130 | ENSDORP00000026160 | 5-aminolevulinate synthase. | Sorbitol dehydrogenase. | 0.866 |
page 1 of 5