STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Thoc6THO complex subunit 6 homolog. (341 aa)    
Predicted Functional Partners:
Thoc1
THO complex subunit 1.
    
 0.996
Thoc5
THO complex subunit 5 homolog isoform X1.
   
 0.995
LOC105986970
THO complex subunit 7 homolog.
    
 0.990
Thoc3
THO complex subunit 3.
   
 0.990
Thoc7
THO complex subunit 7 homolog isoform X2.
    
 0.990
ENSDORP00000019408
annotation not available
    
 0.989
Thoc2
THO complex subunit 2.
    
 0.989
Ddx39b
Spliceosome RNA helicase DDX39B.
   
 0.985
Ddx39a
ATP-dependent RNA helicase DDX39A.
   
 0.968
Zc3h13
Zinc finger CCCH domain-containing protein 13 isoform X2.
    
 0.953
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.