STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sall2Sal-like protein 2 isoform X1. (1016 aa)    
Predicted Functional Partners:
Sall1
Sal-like protein 1.
 
  
 
 0.799
Bsx
Brain-specific homeobox protein homolog.
   
 0.749
Pou5f1
POU domain protein.
   
 0.694
Pou5f2
POU domain protein.
   
 0.694
Rbbp7
Histone-binding protein RBBP7.
    
  0.674
Rbbp4
Histone-binding protein RBBP4.
    
  0.674
ENSDORP00000027329
annotation not available
    
  0.674
Pou3f4
POU domain protein.
    
 0.671
Gatad2b
Transcriptional repressor p66-beta isoform X1.
    
  0.669
Gatad2a
Transcriptional repressor p66-alpha isoform X1.
    
  0.669
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.