STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cib3Calcium and integrin-binding family member 3. (177 aa)    
Predicted Functional Partners:
Tmc1
Transmembrane channel-like protein.
    
 0.952
Cask
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
 0.866
Tmc2
Transmembrane channel-like protein.
    
 0.860
Tmc3
Transmembrane channel-like protein.
    
 0.860
Myo3a
myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.777
Myo3b
myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.730
ENSDORP00000026405
annotation not available
    
 0.730
Xpc
DNA repair protein complementing XP-C cells.
    
 0.705
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
  0.681
Wdr90
WD repeat-containing protein 90.
    
 
 0.679
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.