STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105997400Lithostathine-1-like. (167 aa)    
Predicted Functional Partners:
Tnc
Tenascin.
    
  0.652
Tnr
tenascin-R.
    
  0.652
Tnn
tenascin-N.
    
  0.652
Habp2
Hyaluronan-binding protein 2.
    
 0.598
F12
Coagulation factor XII.
    
 0.598
Hgfac
Hepatocyte growth factor activator isoform X1.
    
 0.598
Prdm2
PR domain zinc finger protein 2 isoform X1.
    
  0.583
Hapln1
Hyaluronan and proteoglycan link protein 1.
    
  0.557
Egflam
Pikachurin.
    
 0.557
Hcst
Hematopoietic cell signal transducer isoform X2.
    
 0.526
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.