STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chst4Sulfotransferase; Belongs to the sulfotransferase 1 family. (451 aa)    
Predicted Functional Partners:
Chst3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
    
 
0.804
Kera
Keratocan.
     
 0.680
Lum
Lumican.
     
 0.626
Ntan1
Protein N-terminal asparagine amidohydrolase.
      
 0.538
Fam210b
Protein FAM210B.
      
 0.537
Ogn
Mimecan.
     
 0.517
Chst6
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
 
0.481
Muc1
Mucin-1.
     
 0.479
Lmbr1
Limb region 1 protein homolog; Belongs to the LIMR family.
      
 0.453
Muc16
Mucin-16.
   
 
  0.422
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.