Hamp protein (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Hamp

Hepcidin. (86 aa)

Predicted Functional Partners:

Slc40a1

0.957

Lcn2

0.934

Igll1

0.906

C8g

0.692

Dmp1

0.659

Leo1

0.659

Lcn10

0.659

Lcn6

0.659

Ibsp

0.659

ENSDORP00000018383

0.659

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C8g	Hamp	ENSDORP00000019149	ENSDORP00000023686	Complement component C8 gamma chain.	Hepcidin.	0.692
C8g	Lcn6	ENSDORP00000019149	ENSDORP00000014496	Complement component C8 gamma chain.	Epididymal-specific lipocalin-6; Belongs to the calycin superfamily. Lipocalin family.	0.537
Dmp1	Hamp	ENSDORP00000002070	ENSDORP00000023686	Dentin matrix acidic phosphoprotein 1 isoform X1.	Hepcidin.	0.659
Dmp1	Ibsp	ENSDORP00000002070	ENSDORP00000017807	Dentin matrix acidic phosphoprotein 1 isoform X1.	Bone sialoprotein 2.	0.603
ENSDORP00000018383	Hamp	ENSDORP00000018383	ENSDORP00000023686	annotation not available	Hepcidin.	0.659
Hamp	C8g	ENSDORP00000023686	ENSDORP00000019149	Hepcidin.	Complement component C8 gamma chain.	0.692
Hamp	Dmp1	ENSDORP00000023686	ENSDORP00000002070	Hepcidin.	Dentin matrix acidic phosphoprotein 1 isoform X1.	0.659
Hamp	ENSDORP00000018383	ENSDORP00000023686	ENSDORP00000018383	Hepcidin.	annotation not available	0.659
Hamp	Ibsp	ENSDORP00000023686	ENSDORP00000017807	Hepcidin.	Bone sialoprotein 2.	0.659
Hamp	Igll1	ENSDORP00000023686	ENSDORP00000023951	Hepcidin.	Immunoglobulin lambda-like polypeptide 5.	0.906
Hamp	Lcn10	ENSDORP00000023686	ENSDORP00000014495	Hepcidin.	Epididymal-specific lipocalin-10; Belongs to the calycin superfamily. Lipocalin family.	0.659
Hamp	Lcn2	ENSDORP00000023686	ENSDORP00000013008	Hepcidin.	Neutrophil gelatinase-associated lipocalin; Belongs to the calycin superfamily. Lipocalin family.	0.934
Hamp	Lcn6	ENSDORP00000023686	ENSDORP00000014496	Hepcidin.	Epididymal-specific lipocalin-6; Belongs to the calycin superfamily. Lipocalin family.	0.659
Hamp	Leo1	ENSDORP00000023686	ENSDORP00000006397	Hepcidin.	RNA polymerase-associated protein LEO1.	0.659
Hamp	Slc40a1	ENSDORP00000023686	ENSDORP00000021922	Hepcidin.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.957
Ibsp	Dmp1	ENSDORP00000017807	ENSDORP00000002070	Bone sialoprotein 2.	Dentin matrix acidic phosphoprotein 1 isoform X1.	0.603
Ibsp	Hamp	ENSDORP00000017807	ENSDORP00000023686	Bone sialoprotein 2.	Hepcidin.	0.659
Igll1	Hamp	ENSDORP00000023951	ENSDORP00000023686	Immunoglobulin lambda-like polypeptide 5.	Hepcidin.	0.906
Lcn10	Hamp	ENSDORP00000014495	ENSDORP00000023686	Epididymal-specific lipocalin-10; Belongs to the calycin superfamily. Lipocalin family.	Hepcidin.	0.659
Lcn10	Lcn6	ENSDORP00000014495	ENSDORP00000014496	Epididymal-specific lipocalin-10; Belongs to the calycin superfamily. Lipocalin family.	Epididymal-specific lipocalin-6; Belongs to the calycin superfamily. Lipocalin family.	0.612